Table taken from Sam Killermann’s A Guide to Gender, p. 75

Difference in Sex Development Rate
Not XX and Not XY 1 in 1,666 births
Klinefelter (XXY) 1 in 1,000 births
Androgen Insensitivity Syndrome 1 in 13,000 births
Partial Androgen Insensitivity Syndrome 1 in 130,000 births
Classical Congenital Adrenal Hyperplasia 1 in 13,000 births
Late Onset Adrenal Hyperplasia 1 in 66 individuals
Vaginal Agenesis 1 in 6,000 births
Ovotestes 1 in 6,000 births
Idiopathic (no discernible medical cause) 1 in 110,000 births
Iatrogenic (caused by medical treatment) No estimate
5 Alpha Reductase Deficiency No estimate
Mixed Gonadal Dysgenesis No estimate
Complete Gonadal Dysgenesis 1 in 150,000 births
Hypospadias (in perineum or penile shaft) 1 in 2,000 births
Hypospadias (between corona and tip of penis) 1 in 770 births
Total number of people whose bodies differ from standard male or female 1 in 100 births
Total number of people receiving surgery to “normalize” genital appearance 1 or 2 in 1,000 births